Hi! I am new to bioinformatics and was recently playing around with tophat. I wanted to know how to analyse the results. Also, if the results state, 97% high-quality filter reads mapped on the reference genome, what does it signify? If you could help out with the same for fast qc results where again results are over 99% What can we say other than "Good" or "high-quality results".
Thank you so much!!