Split Y-Axis of a manhattan plot in qqman (using R)
0
0
Entering edit mode
3 months ago
tacrolimus ▴ 100

I am using qqman to plot a manhattan, my top hit is significantly above the others and is not showing up. I have edited the ylim to incorporate it but then that squashes the rest of the image down. Is there a way of putting in a y axis break in qqman or will I have to use another tool?

Many thanks

Example code:

manhattan(dt, ylim=c(0,20), cex.axis=0.6, col = c("darkorange", "deepskyblue3"), annotatePval=0.0001, genomewideline=-log10)0.05/p), suggestiveline = FALSE, chrlabs=c(1:22, "X")) 
manhattan R genomics • 208 views
ADD COMMENT

Login before adding your answer.

Traffic: 1976 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6