I have downloaded the gene expression data for Bladder cancer from TCGA and I wanted to select some patients based on the information provided in exposure file.
Unfortunately the file names (FPKM or FPKM-UQ) does not match with the ids in exposure file.
I inspected the metadata file and could found the corresponding ids for only 25% of file names.
Could any one guide me to solve this problem?
Thank u in advance