I have the following docking results:
Dock_1 has better energy score than
What I want to do is to show with Pymol that
Dock_1 is better visually.
Here I use hydrogen bond, highlighted with Yellow (
Dock_1) and Gray (
But as you can see, with that I can't show that
Dock_1 is clearly better.
That's why I'm looking for better alternative than hydrogen bond.