3d structure without PDB
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3 months ago
dachi • 0

Hello Everyone, I want to ask how can I do a 3d structure on data that doesn't have a PDB code. Thanks.

bioinformatics python biopython • 357 views
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3 months ago

You can model the protein using homology modeling/threading

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Doesn't work for me cause I get a PDB code with small data that not contains the position that I want to see.

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You can model a whole protein molecule using homology modeling/threading. That starts with a Fasta file. You may use Modeler if you want to model missing residues inside a protein. That starts from a PDB file.

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I tried the homology modeling in swiss modeling but it gives me a PDB code that not contains a position that I want.

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