pycoQC Report - Interval unit in output over time plot
0
0
Entering edit mode
6 days ago
chrys ▴ 40

Hi there,

I am using PycoQC for some QC of Nanopore reads. I am however a little confused by some units in the output over time plot. See this plot: enter image description here

I assume the unit scale on count is "million bases" and it fits well for the cumulative output. However concerning the interval, I am a little confused on what the unit scale is. Intuitively I would say bases per time increment but this does not fit very well to the y-axis.

I checked the publication and the doc and did not find a satisfactory explanation as to what the information here is. Maybe somebody has an idea on how to interpret the interval line. Thanks!

QC pycoQC Nanopore • 62 views
ADD COMMENT

Login before adding your answer.

Traffic: 1547 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6