Deleted:subsetting vcf file in r
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2.7 years ago
ams2sa • 0

I have a vcf file that I want to subset it for specific locations on a chr. I have been using vcftools on a shared cluster to subset my vcf files previously. So I have a vcf file from a part of a chr for some individuals. I want to choose part of this vcf (change the start and the end positions). How can I do that in R?

vcf genomics R • 480 views
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