Rename "SM" tag in read group only

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4.0 years ago

vctrm67 ▴ 50

Is there a way to only rename the "SM" tag for all read groups for a sample BAM? AddOrReplaceReadGroups by GATK replaces everything, which isn't what I want.

GATK • 724 views

ADD COMMENT • link updated 2.7 years ago by Lucy ▴ 140 • written 4.0 years ago by vctrm67 ▴ 50

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I would also like to know how to do this!

ADD REPLY • link 2.7 years ago by Lucy ▴ 140

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