Hello, I am looking for metagenomic sequencing data in fastq format in order to test my pipeline. I read that I can find these type of data by going to NCBI. I have three questions and appreciate any help.
- Where or how can I find this data in NCBI?
- Is there any other sources I can download this type of data?
- How can I find reference data for antimicrobial resistance mechanism?
You can download SRA file by using SRAtoolkit