Entering edit mode
2.7 years ago
lauren
▴
20
in python ,parse out an EMBL record from a (file) , parse out the sequence ID (line starts with ID), description (DE) and sequence (SQ) and used one function.
file content:
ID AB000263 standard; RNA; PRI; 368 BP.
XX
AC AB000263;
XX
DE Homo sapiens mRNA for prepro cortistatin like peptide, complete cds.
XX
SQ Sequence 368 BP;
acaagatgcc attgtccccc ggcctcctgc tgctgctgct ctccggggcc acggccaccg 60
ctgccctgcc cctggagggt ggccccaccg gccgagacag cgagcatatg caggaagcgg 120
caggaataag gaaaagcagc ctcctgactt tcctcgcttg gtggtttgag tggacctccc 180
aggccagtgc cgggcccctc ataggagagg aagctcggga ggtggccagg cggcaggaag 240
gcgcaccccc ccagcaatcc gcgcgccggg acagaatgcc ctgcaggaac ttcttctgga 300
agaccttctc ctcctgcaaa taaaacctca cccatgaatg ctcacgcaag tttaattaca 360
gacctgaa 368
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It could be me, but I am missing a question here. Also, it would help to format the post better.
biopython