I'm trying to install HTSeq as described in the link below
Cause I'm ussing ubuntu, I used this command
sudo apt-get install build-essential python3.6-dev python-numpy python-matplotlib python-pysam python-htseq
And I got error message
Reading package lists... Done Building dependency tree Reading state information... Done Note, selecting 'python3-htseq' instead of 'python-htseq' Package python-matplotlib is not available, but is referred to by another package. This may mean that the package is missing, has been obsoleted, or is only available from another source E: Package 'python-matplotlib' has no installation candidate
As shown in the error message, I add letter 3 after python like below
sudo apt-get install build-essential python3.6-dev python3-numpy python3-matplotlib python3-pysam python3-htseq
And it seems to be installed!
And I try to confirm the program is well installed with this command in python
>>> import HTSeq
and I got error message
Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/usr/lib/python3/dist-packages/HTSeq/__init__.py", line 13, in <module> from HTSeq._HTSeq import * ModuleNotFoundError: No module named 'HTSeq._HTSeq'
and now I can't fix this problem yet
can anyone tell me how I can fix it?