I downloaded in my terminal indexed file of UCSC hg19 and when I uncompressed it, I found two files
genome.8.ht2. Every time I want to align my samples at indexed file this error show up
[e::bwa_idx_load_from_disk] fail to locate the index files command exited with non-zero status 1
So, my question is: Which one of two files I should use and how use
file.ht2 in alignment?