Question

FreeBayes Error

0

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2.7 years ago

Julia • 0

Hi- I am trying to use FreeBayes to identify polymorphic sites and it will not run. It keeps throwing this error "unable to find fasta index entry for GL630349". Does anyone know what to do in this situation? Thank you

Galaxy Coursera FreeBayes Polymorphisms • 696 views

ADD COMMENT • link updated 2.7 years ago by Jianyu ▴ 580 • written 2.7 years ago by Julia • 0

score 1 · Answer 1 · 2021-08-21

1

Entering edit mode

2.7 years ago

Jianyu ▴ 580

Try samtools index, I found some posts with similar issues:

https://biostars.org/p/240572/

Unable to find FASTA index entry for '1'

ADD COMMENT • link 2.7 years ago by Jianyu ▴ 580