Exosome sequencing free data
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4 weeks ago
A ★ 4.0k

Hello

exosome • 215 views
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4 weeks ago
GenoMax 107k

sra-explorer (LINK) is your friend. If there is some available you will be able to find it.

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Thank you so much

I need exosome (miRNA+lncRNA+etc) and as you directed me, I found a lot there For instance, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1293751 which says

Human plasma samples has been used to isolate Exosomes prepared from whole blood using the ExoQuick Exosome Precipitation Solution (SBI) according to the manufacturer’s instructions with minor modifications. But, they say we identified miRNAs in these plasma samples against known human matured miRNAs

Does this mean as they have isolated exosome, having SRA sequence, by aligning against human lncRNA reference FASTA I can retrieve lncRNA too or this experiment is just for recovering miRNAs??

Because exosomes is more than miRNA and including lncRNA, etc

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Your guess is as good as mine. Unless something was done to size select miRNA's the data should contain other RNA. You will need to get a sample and test that.