unfortunately Unicycler forum is inactive and I would like to ask some info.
I'm using a workstation of 56 CPUs with GNU parallel.
When I'm running Unicycler with the "--threads 25" option is going "fast".
When I use GNU parallel, 2 jobs in parallel, is going slower even if I use the "--treads 25" option for all jobs.
I just made a copy of a fastq file (pair-end) to create the samples for the jobs.
Do you have any experience with this and any advice?