Update SNP map
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7 weeks ago
Rafael • 0

I have a 43k UMD map, and I would like to update to ARS (new reference genome). How can I do it? Are there any software or R package, Plink command?

assembly update SNP map • 174 views
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Entering edit mode
7 weeks ago
tothepoint ▴ 610

There are three different ways I found to update the information during the same situation:

1 Liftover

2 NCBI Remap tool

3 Bovinemine database

Explore them and best of luck..!!

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