Missense Variant on hg19

Question

[martin.gallix]

Hello everybody,

I am using plink for doing some statistic studies on a SNP set. I would like to use only missense variant, and I have the IDs of my SNPs of interesting. Can someone suggest me how can I download a database of homo sapiens SNP (v. hg19) with the information of missense/non-sense ?

Thank you

Answer 1

[Pierre Lindenbaum]

Can someone suggest me how can I download a database of homo sapiens SNP (v. hg19) with the information of missense/non-sense ?

http://database.liulab.science/dbNSFP

dbNSFP is a database developed for functional prediction and annotation of all potential non-synonymous single-nucleotide variants (nsSNVs) in the human genome