Pan-genome visualization similar to anvio?
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2.6 years ago

I like the circular pan-genome visual output of anvio but it is a beast to use. Is there a way to make a similar figure using the output of roary or panaroo? A link or direction towards some code that might do so would be greatly appreciated!

analysis pangenome • 888 views
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Maybe you can achieve something similar with ComplexHeatmap

edit: here is the part of the tutorial for circular heatmap

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