what does mean this error ? "(ERR): hisat2-align exited with value 1" in mapping long noncoding RNAs
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2.5 years ago
reza • 0

Hello everyone.what does mean this error ? "(ERR): hisat2-align exited with value 1" in mapping long noncoding RNAs.

mapping long RNAs non-coding • 1.5k views
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Post the command line arguments you used.

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hisat2  -x /home/k/Desktop/arabid/fastq/2d/arabidindx/index  -1 /home/k/Desktop/arabid/fastq/2d/SRR8511589_1.fastq.gz -2 /home/k/Desktop/arabid/fastq/2d/SRR8511589_2.fastq.gz  -S /home/k/Desktop/arabid/fastq/2d/hisatout/SRR8511589.sam
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thanks a lot

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Do you get the error right away or after some time?

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thank u.solved

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