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3.0 years ago
Nobody
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30
Hi everyone!
I need a method "api" to retrieve reads length from SRA.
Thanks in advance
Hi everyone!
I need a method "api" to retrieve reads length from SRA.
Thanks in advance
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You will only get average length of reads (which may or may not be very useful) using Entrezdirect.
The suggested methods works. Here is another method using the SRA toolkit
Read 1 spots for SRR5790106
Written 1 spots for SRR5790106
100
this assumes that read length is the same for all reads
Find NGS datasets on GEO that have a certain read length?