How to add metadata to dendrogram of hierarchical clustering in R
0
0
Entering edit mode
5 weeks ago
BlueSky ▴ 10

I have a RNAseq dataset with genes as rows and samples as columns. I have managed to do hierarchical clustering of the samples, and I want to look for subgroups in the disease. I additionally have metadata with sample names as one column and lesion type in the other column. I want to add the metadata to the hierarchical cluster dendrogram so that I can display the "lesional", "control", or "non lesional" category of the samples. How do I do that in R?

metadata Hierarchical clustering • 184 views
ADD COMMENT
1
Entering edit mode

something like complexheatmap?

ADD REPLY

Login before adding your answer.

Traffic: 2876 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6