PPI-Network igraph for tissue-specific data
0
0
Entering edit mode
2.6 years ago
bi.nb21 • 0

I am new to bioinformatics in general and would really appreciate some help with the project Im working on.

My data of protein-protein interactions is constructed in a table (stored in MySQL) with binary information about tissue-specificity. Now I am trying to create an undirected graph with igraph in R, but could not understand what type of data structure I should use without losing the tissue-information (Adjacency matrix, edge list...).

Thank you in advance!

enter image description here

enter image description here

interaction protein igraph R network • 476 views
ADD COMMENT

Login before adding your answer.

Traffic: 1968 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6