Convert a gene into amino sequences
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Entering edit mode
12 months ago
vpsev3 ▴ 20

Hello,

I'm trying to convert a gene (DNA) into a protein (amino acids)

I tried to convert them but I have a lot more amino acids than here for example https://alphafold.ebi.ac.uk/entry/Q8W3K0

This is what I tried https://web.expasy.org/translate/

I try to find a software where I just have to enter the sequence and I will have the result

alphafold • 515 views
3
Entering edit mode
12 months ago
GenoMax 120k

If this is a known gene then you don't need to do this manually. e.g. https://www.ncbi.nlm.nih.gov/nuccore/NM_000207.3/ is human insulin. If you look at the record you will find a link for protein sequence NP_000198.1 in that record. Or you could simply search for protein sequence directly using the name of the gene.

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Entering edit mode

Thank you it works

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Entering edit mode
6 days ago

For known genes you can use gget seq: https://github.com/pachterlab/gget