Entering edit mode
2.5 years ago
rachid.fermi
•
0
I'm running a bioinformatic tool called ltr finder, when I ran the command bellow
ltr_finder $DATA/$organis_name.fna -s $tRNA/${organis_name}_trna.fasta -a $LTR_Finder/ps_scan -w2 -E -C > $ltr_table/$organis_name.table
with the $organis_name changes from one genome to another.
In some genomes I don't get this message and in some I get it.
So my question is what does this message
[aln_local_core] Cannot find reasonable band width. Continue anyway?
mean and if the tools continue anyway, would that affect the result?
