450k Illumina error for some probe converting hg19 to hg38
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6 weeks ago
ajajoo ▴ 10

Using liftOver to convert CpG probes of 450K Illumina, hg19 to hg38 but some probes can not be converted. Some examples

cg23887839 chr1  12606996  12606997
cg24299149 chr1  13501140  13501141
cg07784526 chr1 120838320 120838321
cg18948743 chr1 120838323 120838324

But I can find them here https://zwdzwd.github.io/InfiniumAnnotation in hg38 annotation. What am I missing?

Illumina450k liftOver • 112 views
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