How to include a Jmol Console Script in a Python Script
0
0
Entering edit mode
7 weeks ago
kbaitsi • 0

I have created a python script and a Jmol Console Script. How can I load the Jmol Console Script into the Python Script?

For example I have this Jmol Console Script:

load 'ligand_PDB_entry_prompt'
select water ;
delete selected ;
select protein ;
delete selected ;
select model=1.1 ;
write 'new_ligand_dir' ;
write 'new_xyzligand_dir' 

ligand_PDB_entry_prompt is an input in my python program and new_ligand_dir and new_xyzligand_dir are variables created upon the ligand_PDB_entry_prompt.

How can I include the above script as a variable (load_ligand) I can call later on in my python script?

Thank you in advance.

Python Jmol Script • 117 views
ADD COMMENT

Login before adding your answer.

Traffic: 1499 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6