analysing basemods in old pacbio data; advice on setting up SMRT link/tools
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11 months ago

I have pacbio data from old sequencing projects and I want to analyse them for base modifications and motifs but I no longer have access to a SMRT link setup at a sequencing facility. I would need to install SMRT link or the SMRT tools package on a personal computer (iMac). Does anyone have any tips or suggestions on how best to proceed. The SMRT software is open source the installation does not appear straightforward. I can't find any 3rd party software to do the same thing. I'm sure there must be lots of others sitting on pacbio data that has not been examined for methylation and would like to do so.

smrt basemods pacbio • 313 views
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