filter barplot large VCF
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11 months ago
kazakkaty • 0

hello everyone, I am doing in Rstudio the large VCF sorting DP by loci using dp = extract.gt (vcf, element = 'DP', as.numeric = TRUE) dploc = apply (dp, 1, sum) barplot (sort (dploc), las = 3, main = "DP", col = 1:12). How can I save the selected square of data in a separate dataframe, so that later on this data I can make a filter and a graph by GQenter image description here?

largeVCF NGS GQ R filter barplot dp RStudio • 224 views
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