load fasta and gff3 file into mysql
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6 weeks ago

Recently, I needed to make a database --MySQL.

I need to import the FASTA file and annotation file for the reference genome into the database.

But I can't find a good way. I hope I can give you some suggestions. Thank you

mysql • 159 views
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load fasta and gff3 file into mysql

what's your aim with such database ? because a simple LOAD local DATA INFILE "the.gff" INTO TABLE gff COLUMNS TERMINATED BY '\t' IGNORE 1345 LINES would work?

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