python package for Kendall-Colijn distances between phylogenetic trees
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4 weeks ago
Hongjin • 0

Dose anyone know if there is a python package for Kendall-Colijn distances between phylogenetic trees? Thanks

biology genealogy evolution • 199 views
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ETE3 toolkit can calculate tree distances, though not exactly the one you want.

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4 weeks ago
Hongjin • 0

Thanks! I am using ETE3. Unfortunately it only support unweighted Robinson-Foulds distance. I need weighted Robinson-Foulds distance and Kendall-Colijn distance. ETE3 can not do this. Although I find some R packages meet part of the demanding. But python packages is preferred!

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