Is there is any tools to calculate the Average Nucleotide Identity (ANI) among the Plasmodium genomes?
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5 weeks ago
bhavya2269 • 0

Hello Everyone,

Is there is any tools to calculate the Average Nucleotide Identity (ANI) among the Plasmodium genomes. Any suggestion will be deeply appreciated.

Thank you

sequence ANI alignment calculator • 306 views
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5 weeks ago
colindaven ★ 3.3k

There is a quick one here which doesn't do full alignments (might be less accurate, but fast). Usage may be appropriate depending on how many genomes you want to compare.

https://github.com/ParBLiSS/FastANI

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