Using IMPUTED genotype data from UK Biobank to generate PRS scores using PRSice

Question

[Jenish]

Does the PRSice-2 tool support working with imputed genotype data provided by UK Biobank as listed here: https://biobank.ctsu.ox.ac.uk/crystal/label.cgi?id=263 ?

Answer 1

[Sam]

Yes, use --type bgen, but be warned, that can be slow.