Artemis tool usage

Question

[anjalivasudevan98]

Hi,

Can somebody please tell me how to obtain the .tab annotated file for a genome?

I'm learning how to use Artemis software. So I've to input a .dna (fasta file) and a .tab( which I believe is the annotated file of that genome). I've taken the S.typhi genome as .dna file. But I don't know how to get the .tab file.

Many thanks in advance.

Answer 1

[Joe]

You should be able to read in a GFF file of annotations over a FASTA file, otherwise you can just load a GBK or GFF (Full) if memory serves.

Pretty sure a .tab file is just a tsv of genomic features which is basically what a GFF is.

[anjalivasudevan98]

Thank you, I just tried using the .gbk file and it seems its working. Thanks for the response!