It is probably a very basic question, yet i struggle to find an answer to it. My lab ordered a whole genome sequence in a commercial firm, not long ago we received from them a few .fasta files with many short sequences in them. As i understand, i now need to map these short sequences to a reference genome to obtain one long sequence. Any ideas how i can do it? I tried a few software programs but it seems they all need .abi files not .fasta as an input.