Prokka
0
0
Entering edit mode
6 weeks ago
Elaine ▴ 10

Hello! I would like to ask for help on how can I present the results of my annotation using Prokka. I have also done annotation using the web-server of RAST which gave out a nice pie chart. Can I also achieve this using the outputs from Prokka? I tried using the Krona-visualization tool in usegalaxy but I can't seem to produce a graph/chart. Thank you very much!

CDS prokka krona annotation • 336 views
ADD COMMENT
0
Entering edit mode

A visualisation of what? Number of genes?

ADD REPLY
0
Entering edit mode

Hi, the distribution of genes per category just like in RAST. Thanks!

ADD REPLY
0
Entering edit mode

Prokka doesn't support this itself. You'd have to write some custom code most likely.

ADD REPLY

Login before adding your answer.

Traffic: 2299 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6