How to download all structures of complexes in PDB
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6 weeks ago
sunyeping ▴ 30

Dear all,

Does anyone know how to download all structures of complexes in PDB? For complex I mean the structures containing more than one chains which forms biological interactions with each other? Is there any search filter in pdb

With many thanks in advance!

pdb • 243 views
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6 weeks ago
M.O.L.S ▴ 40
enter code here
# Import Bio.PDB
  import Bio.PDB

# create a parser and dont mention the warnings. 
 parser = Bio.PDB.PDBParser(QUIET=True)

# Get the structure/s from a file
  structures = parser.get_structure(' put the name of the structure/s here ' ,  ' put the filename here e.g protein.pdb ' )
  print(structures)
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While this code will work for one, original post is asking about downloading all structures of complexes.

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What would you suggest? =]

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