Redundancy analysis (RDA) for metagenomic community
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9 months ago
arshad1292 ▴ 70

Hello

I want to do Redundancy analysis (RDA) to see variation in my bacterial community samples but I am kinda lost and don't know where to start. I searched online but couldn't find any. Is there any R code or tutorial available for that purpose?

I would really appreciate all/some help.

Many thanks in advance!

bacterial RDA analysis community Redundancy metagenome • 360 views
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Entering edit mode
9 months ago
patrickdm ▴ 160

Hello, out of curiosity I did a quick search and found a presentation (Dirk Metzler & Martin Hutzenthaler, 2011) where you can find an example of usage of a library(vegan) # rda() is in this library

I never used the library nor performed any RDA before, so pls aplogize me if I'm pointing you in a wrong direction. Hth

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