Entering edit mode
2.3 years ago
koesuki
•
0
I accidentally prepared and docked two files of same ligand. I use Avogadro to optimize both of these ligands files. I use same algorithm and force field for optimization. However, the docking result indicated that both of these ligands had different binding energies and poses. So I want to ask if it is normal to have different result although it is the same ligand? Or there is actually something wrong with my AutoDock Vina software?
