Long read de novo phylogenetic tree for metagenome
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13 months ago
student • 0

What tools are available to create de novo phylogenetic trees for long read metagenome datasets? phyloT seems to construct one based on taxonomy and NCBI/GTDb information rather than read alignment. Is MAFFT commonly used? What is the standard methodology?

(For reference, I am an undergraduate, and my PI asked I post a question about this.)

phylogenetics metagenome • 253 views
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