Is there any way to access the --cores argument in a snakemake workflow?
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3.1 years ago
curious ▴ 750

f I run snakemake --cores 56, is there anyway to access the argument inside a snakemake rule?

I realize I could have a configfile value, but I am hoping there is something like args.cores that would give me what it passed at the command line. I crossposted to stack overflow several days ago but was not able to find help

snakemake • 734 views
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workflow.cores would work for you inside the run block

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