AFD plot for each VCF file
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8 months ago

I have 2 test directories: dir

and one tsv file that contains information about the population: pop

I want to write a piece of code that will create an AFD plot for each VCF file in a folder

The output should be an AFD dot plot for each VCF file in the directory. The plot should give the AFD between population 1 (diploids) and population 2 (tetraploids)

Is this work possible through python? Is there any package which i can use?

Allele python Bioinformatics • 382 views
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