Entering edit mode
2.2 years ago
aimanbarki
▴
20
Hello everyone, I downloaded healthy data set from the following website: BioProject_NCBI. I ran the Fast QC. This is how the results look like R1 vs R2:
Is it normal or R1 is really bad? How should i proceed next?
Thanks
GenoMax Thanks for the answer. But, it leads to another question i.e. Does Cellranger count automatically select the read its need to use. As we only provide the path to the fastq folder?
Cellranger will use the number of bases it needs from read 1 based on chemistry used.