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7 days ago
dec986 ▴ 310

I’ve downloaded an allele frequency database from https://ftp.ncbi.nih.gov/snp/population_frequency/latest_release/, but I don’t know what build version chromosome NC_000001.9 is, which I think I’d need to know for liftOver, is there an easy way that I could convert this 11GB VCF to build 37?

also where could I find a bed file for this? the file has 904,167,063 lines.

liftover • 61 views