I'm trying to annotate my bacteria variants with SnpEff,
java -jar snpEff.jar -v Mycoplasma_hyopneumoniae_168_l /mnt/f/mycopn/variantcalling.vcf > /mnt/f/mycopn/res.ann.vcf
All my Reference and snpEff database are
Mycoplasma_hyopneumoniae_168_l, but I got into trouble.
The annotated vcf file contains empty ID column with
I read about the error, but could not get any hint how to fix it as I'm newbie.
Would you please help me? Best Regards...