- I try to run Bio-MLST and i got this error? Anyone know how to solve it ?
./get_sequence_type -s "Pseudomonas aeruginosa" /home/neel@m95/Desktop/AMR/fna/.fa**
No message received from child process 6443! No message received from child process 6442! Couldn't find a single MLST profile No message received from child process 6444! Attribute (header) does not pass the type constraint because: Validation failed for 'ArrayRef' with value undef at constructor Bio::MLST::Spreadsheet::File::new (defined at ../lib/Bio/MLST/Spreadsheet/File.pm line 44) line 39 Bio::MLST::Spreadsheet::File::new('Bio::MLST::Spreadsheet::File', 'header', undef, 'spreadsheet_allele_numbers_rows', 'ARRAY(0x55e078e152a0)', 'spreadsheet_genomic_rows', 'ARRAY(0x55e078f09be0)', 'output_directory', '/home/neel@m95/Desktop/AMR/MLST/Bio_MLST/bin', 'spreadsheet_basename', 'mlst_results') called at ../lib/Bio/MLST/Check.pm line 108 Bio::MLST::Check::create_result_files('Bio::MLST::Check=HASH(0x55e0776e2d58)') called at get_sequence_type line 144
Thank you
