Upset plot in ComplexHeatmap
1
0
Entering edit mode
3 months ago

Hello everyone

I am interested in developing the Upset plot for multiple sets of genes. I am using ComplexHeatmap R package for the Upset plot development. I have 49 sets for which I would like to highlight the interested count. I am using function make_comb_mat , but it gives me error

Error: Only support number of sets <= 31.

Has anyone experience this issue before?

I would appreciate all the suggestions.

ComplexHeatmap Upsetplot • 386 views
ADD COMMENT
1
Entering edit mode
3 months ago
ATpoint 60k

It means the tool allows only up to 31 sets. And tbh, don't tell me that an upset with dozens of sets is informative. You get like hundreds of possible intersection combinations with that many sets.

ADD COMMENT
0
Entering edit mode
ADD REPLY

Login before adding your answer.

Traffic: 2169 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6