In mRNA vs Dx plot, how we can explain the expression of EGFR without color annotation, and when colouring by copy number, and by mutation?
are these explanation correct: explanation: Without any colour annotation: This is showing mRNA expression level of EGFR in different cancer types without showing any mutation of copy number. without color for mutation or CNAhttps://ibb.co/x6382bM
explanation: Colour sample by mutation type: In this case, we can see that most of the mutations are missense. Also, in Glioblastoma missense mutation shows the highest level of mRNA expression. https://ibb.co/x5V8Kr8
explanation: Color samples by copy number: In this case, we can see that most of the copy number alterations are amplification and gain. Also, the amplifications have the outliers with the highest level of mRNA expression that is in Glioblastoma. https://ibb.co/nmGdd6z
