How to detect CNV via readDepth with multiple samples
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7 months ago
seabed0705 • 0

How to detect CNV via readDepth with multiple samples??

I know how to detect CNV via readDepth with single samples..

readDepth CNV • 285 views
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run readDepth multiple times?

in mathematics it is called "reduce the problem to the previous one"

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You can try cnvkit and/or ExomeDepth... Both will work from you .bam files!

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