Entering edit mode
2.6 years ago
Bogdan
★
1.4k
Dear all,
I am using a R package that renders the png images. As I am running the command below in a script, I would like to avoid the error below and still be able to save the images.
ChIPQCreport(SAMPLE,
reportName = paste(ENTRY, "ChIPQC", sep="."),
reportFolder = paste(ENTRY, "ChIPQCreport", sep="."))
Saving 7 x 7 in image
Error in png_dev(..., res = dpi, units = "in") : X11 is not available
Shall I add the option :
options(bitmapType='cairo')
the png images are skipped and not saved on the disk. Thanks a lot,
Bogdan
Do you have X11 installed...?
Cross-posted: https://support.bioconductor.org/p/9142331
Yes, X11 is installed. I am sorry for cross-posting, it is an urgent matter for me these minutes.
What do you see for X11 and cairo when doing
capabilities()
from within R?