Are there other options for Visualization of Organism-Scale Metabolic Networks

Question

[Juliana]

Hi, I am looking for a tool to generate a brief visualization of my pathways in the cell. I have tried, cytoscape but It is not what I want. I would like to have a diagram very similar to the biocyc metabolic map (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7911265/) The issue is that Ido not have a subscription Any suggestion? Thanks

Answer 1

[Michael]

How about Reactome? Reactome is part of ELIXIR core data resources and therefore free to use for all. I think its interface is superior to the *Cycs in many aspects.

See also: Could somebody suggest free pathway visualization tool for omics data from plants? KEGG is also free to visualize individual pathways. You have to obtain permission to use KEGG maps in papers.